1. Mora-Ortiz, M., Trichard, M., Oregioni, A. & Claus, S. P. Thanatometabolomics: introducing NMR-based metabolomics to identify metabolic biomarkers of the time of death. Metabolomics0, 0–0 (2019). doi: 10.1007/s11306-019-1498-1Published ahead of print
Le Roy, C. I., Woodward, M. J., Ellis, R. J., La Ragione, R. M. & Claus, S. P. Antibiotic treatment triggers gut dysbiosis and modulates metabolism in a chicken model of gastro-intestinal infection. BMC Vet. Res. 15, 37 (2019). doi: 10.1186/s12917-018-1761-0
Sanz, Y. et al. Towards microbiome-informed dietary recommendations for promoting metabolic and mental health: Opinion papers of the MyNewGut project. Clin Nutr37, 2191–2197 (2018). doi: 10.1016/j.clnu.2018.07.007
Blachier, F. et al. High-protein diets for weight management: Interactions with the intestinal microbiota and consequences for gut health. A position paper by the my new gut study group. Clin Nutr 1–11 (2018). doi:10.1016/j.clnu.2018.09.016
Hassan, A. M., Mancano, G., Kashofer, K., Fröhlich, E. E., Matak, A., Mayerhofer, R., Reichmann, F., Olivares, M., Neyrinck, A., Delzenne, N. M., Claus, S. P., Holzer, P. (2018). High-fat diet induces depression-like behaviour in mice associated with changes in microbiome, neuropeptide Y, and brain metabolome. Nutritional Neuroscience0, 1–17. doi: 10.1080/1028415X.2018.1465713
Beaumont, M., Portune, K.J., Steuer, N., Lan, A., Cerrudo, V., Audebert, M., Dumont, F., Mancano, G., Khodorova, N., Andriamihaja, M., et al. (2017). Quantity and source of dietary protein influence metabolite production by gut microbiota and rectal mucosa gene expression: a randomized, parallel, double-blind trial in overweight humans. Am J Clin Nutr106, 158816–1019. doi: 10.3945/ajcn.117.158816
Mora-Ortiz, M. and Claus, S. P. (2017). Choline theft – an inside job. Cell Host & Microbe, 22 (3), 253-255. doi: 10.1016/j.chom.2017.08.017
Claus, S. P. (2017). Will Gut Microbiota Help Design the Next Generation of GLP-1-Based Therapies for Type 2 Diabetes? Cell Metabolism, 26 (1), 6-7. http://dx.doi.org/10.1016/j.cmet.2017.06.009
Le Roy, C. I., Passey, J. L., Woodward, M. J., La Ragione, R. M., Claus, S. P. (2017). Metabonomics-based analysis of Brachyspira pilosicoli’s response to tiamulin reveals metabolic activity despite significant growth inhibition. Anaerobe, 45, 71-77. https://doi.org/10.1016/j.anaerobe.2017.03.018
Le Roy, C. I., Mappley, L. J., La Ragione, R. M., Woodward, M. J., Claus, S. P. (2016). NMR-based metabolic characterization of chicken tissues and biofluids: a model for avian research. Metabolomics, 12 (10), 157. doi: 10.1007/s11306-016-1105-7
Matysik, S., Le Roy, C. I., Liebisch, G., Claus, S. P. (2016). Metabolomics of fecal samples: a practical consideration. Trends in Food Science & Technology. doi 10.1016/j.tifs.2016.05.011
Claus, S.P., Guillou, H. and Ellero-Simatos, S. (2016). The gut microbiota: a major player in the toxicity of environmental pollutants? npj Biofilms and Microbiomes, 2, 16003. doi: 10.1038/npjbiofilms.2016.3
Frej, A.D., Clark, J., Le Roy, C. I., Lilla, S., Thomason, P., Otto, G. P., et al. (2016). The inositol-3-phosphate synthase biosynthetic enzyme has distinct catalytic and metabolic roles. Molecular and Cellular Biology, 36 (10), 1464-79.doi: 10.1128/MCB.00039-16
Bindels, L. B., Neyrinck, A. M., Claus, S. P., Le Roy, C. I., Grangette, C., Pot, B., et al. (2015). Synbiotic approach restores intestinal homeostasis and prolongs survival in leukaemic mice with cachexia. ISME Journal.doi: 10.1038/ismej.2015.209
Le Roy, C. I., Štšepetova, J., Sepp, E., Songisepp, E., Claus, S. P., & Mikelsaar, M. (2015). New insights into the impact of Lactoacillus population on host-bacteria metabolic interplay. Oncotarget, 1–12.Free text
Woodward, M. J., Mappley, L., Le Roy, C., Claus, S. P., Davies, P., Thompson, G., & La Ragione, R. M. (2015). Drinking water application of Denagard® Tiamulin for control of Brachyspira pilosicoli infection of laying poultry. Research in Veterinary Science, 103, 87–95. doi: 10.1016/j.rvsc.2015.09.015
Vulevic, J., Juric, A., Walton, G. E., Claus, S. P., Tzortzis, G., Toward, R. E., & Gibson, G. R. (2015). Influence of galacto-oligosaccharide mixture (B-GOS) on gut microbiota, immune parameters and metabonomics in elderly persons. British Journal of Nutrition, 114 (04), 1–10. doi: 10.1017/S0007114515001889
Karani, S. V. & Claus, S. P. (2015). Foodomics for personalised nutrition: how far are we?. Current Opinion in Food Science, 4, 129-135. doi: 10.1016/j.cofs.2015.07.001
Claus, S. P. (2014). Mammalian-Microbial Cometabolism of L-Carnitine in the Context of Atherosclerosis. Cell Metabolism, 20(5), 699–700. doi:10.1016/j.cmet.2014.10.014
Claus, S. P. (2014). Development of personalized functional foods needs metabolic profiling. Current Opinion in Clinical Nutrition and Metabolic Care, 17 567–573. doi:10.1097/MCO.0000000000000107
Swann, J. R., and Claus, S. P. (2014). Nutrimetabonomics: nutritional applications of metabolic profiling. Science Progress, 97 (1). pp. 41–47. doi:10.3184/003685014X13898807933527
El Aidy, S., Merrifield, C. A., Derrien, M., van Baarlen, P., Hooiveld, G., Levenez, F., Doré, J., Dekker, J., Holmes, E., Claus, S. P., Reijngoud, D. J. and Kleerebezem, M. (2013) The gut microbiota elicits a profound metabolic reorientation in the mouse jejunal mucosa during conventionalisation. Gut, 62 (9). pp. 1306-1314. doi: 10.1136/gutjnl-2011-301955
Dewulf, E. M., Cani, P. D., Claus, S. P., Fuentes, S., Puylaert, P. G. B., Neyrinck, A. M., Bindels, L. B., de Vos, W. M., Gibson, G. R., Thissen, J.-P. and Delzenne, N. M. (2013) Insight into the prebiotic concept: lessons from an exploratory, double blind intervention study with inulin-type fructans in obese women. Gut, 32 (8). pp. 1112-1121. doi: 10.1136/gutjnl-2012-303304
Merrifield, C. A., Lewis, M. C., Claus, S., Pearce, J. T. M., Cloarec, O., Duncker, S., Heinzmann, S. S., Dumas, M., Kochhar, S., Rezzi, S., Mercenier, A., Nicholson, J. K., Bailey, M. and Holmes, E. (2013) Weaning diet induces sustained metabolic phenotype shift in the pig and influences host response to Bifidobacterium lactis NCC2818. Gut, 62 (6). pp. 842-851. doi: 10.1136/gutjnl-2011-301656
El Aidy, S., Derrien, M., Merrifield, C. A., Levenez, F., Dore, J., Boekschoten, M. V., Dekker, J., Holmes, E., Zoetendal, E. G., van Baarlen, P., Claus, S. P. and Kleerbezem, M. (2013) Gut bacteria-host metabolic interplay during conventionalisation of the mouse germfree colon. ISME Journal, 7. pp. 743-755. doi: 10.1038/ismej.2012.142
Claus, S. P. (2013) Fighting undernutrition: don’t forget the bugs. Cell Host and Microbe, 13 (3). pp. 239-240. doi: 10.1016/j.chom.2013.02.015
Boulange, C. L., Claus, S. P., Chou, C. J., Collino, S., Montoliu, I., Kochhar, S., Holmes, E., Rezzi, S., Nicholson, J. K., Dumas, M. E. and Martin, F.-P. J. (2013) Early metabolic adaptation in C57BL/6 mice resistant to high fat diet induced weight gain involves an activation of mitochondrial oxidative pathways. Journal of Proteome Research, 12 (4). pp. 1956-1968. doi: 10.1021/pr400051s
Claus, S. P. and Swann, J. R. (2013) Nutrimetabonomics: applications for nutritional sciences, with specific reference to gut microbial interactions. Annual Review of Food Science and Technology, 4. pp. 381-399. doi: 10.1146/annurev-food-030212-182612
Richards, S. E., Wang, Y., Claus, S. P., Lawler, D., Kochhar, S., Holmes, E. and Nicholson, J. K. (2013) Metabolic phenotype modulation by caloric restriction in a lifelong dog study. Journal of Proteome Research, 12 (7). pp. 3117-3127. doi: 10.1021/pr301097k
De Castro, N. M., Yaqoob, P., De la Fuente, M., Baeza, I. and Claus, S. P. (2013) Premature impairment of methylation pathway and cardiac metabolic dysfunction in fa/fa obese Zucker rats. Journal of Proteome Research, 2 (4). pp. 1935–1945. doi: 10.1021/pr400025y
Merrifield, C. A., Lewis, M. C., Claus, S. P., Pearce, J. T. M., Cloarec, O., Duncker, S., Heinzmann, S. S., Dumas, M.-E., Kochar, S., Rezzi, S., Mercenier, A., Nicholson, J. K., Bailey, M. and Holmes, E. (2013) Weaning diet induces sustained metabolic phenotype
shift in the pig and influences host response to Bifidobacterium lactis NCC2818. Gut, 62 (6). pp. 842-851. doi: 10.1136/gutjnl-2011-301656
Mestdagh, R., Dumas, M.-E., Rezzi, S., Kochhar, S., Holmes, E., Claus, S. P. and Nicholson, J. K. (2012) Gut microbiota modulate the metabolism of brown adipose tissue in mice. Journal of Proteome Research, 11 (2). pp. 620-630. doi: 10.1021/pr200938v
Cunningham, K., Claus, S. P., Lindon, J. C., Holmes, E., Everett, J. R., Nicholson, J. K. and Coen, M. (2012) Pharmacometabonomic characterization of xenobiotic and endogenous metabolic phenotypes that account for inter-individual variation in isoniazid-induced toxicological response. Journal of Proteome Research, 11 (9). pp. 4630-4642. doi: 10.1021/pr300430u
Heath, P. and Claus, S. (2011) Assessing hepatic metabolic changes during progressive colonization of germ-free mouse by 1H NMR spectroscopy. Journal of Visualized Experiments, 58. doi: 10.3791/3642
Claus, S. P., Ellero, S. L., Berger, B., Krause, L., Bruttin, A., Molina, J., Paris, A., Want, E. J., de Waziers, I., Cloarec, O., Richards, S. E., Wang, Y., Dumas, M.-E., Ross, A., Rezzi, S., Kochhar, S., Van Bladeren, P., Lindon, J. C., Holmes, E. and Nicholson, J. K. (2011) Colonization-induced host-gut microbial metabolic interaction. mBio, 2 (2). e00271-10. doi: 10.1128/mBio.00271-10
Ellero-Simatos, S., Claus, S. P., Benelli, C., Forest, C., Letourneur, F., Cagnard, N., Beaune, P. H. and de Waziers, I. (2011) Combined transcriptomic-(1)H NMR metabonomic study reveals yhat monoethylhexyl phthalate stimulates adipogenesis and glyceroneogenesis in human adipocytes. Journal of Proteome Research, 10 (12). pp. 5493-5502. doi: 10.1021/pr200765v
Merrifield, C. A., Lewis, M., Claus, S. P., Beckonert, O. P., Dummas, M.-E., Duncker, S., Kochhar, S., Rezzi, S., Lindon, J. C., Bailey, M., Holmes, E. and Nicholson, J. K. (2011) A metabolic system-wide characterisation of the pig: a model
for human physiology. Molecular Biosystems, 7 (9). pp. 2577-2588. doi: 10.1039/C1MB05023K
Eveillard, A., Lasserre, F., de Tayrac, M., Polizzi, A., Claus, S., Canlet, C., Mselli-Lakhal, L., Gotardi, G., Paris, A., Guillou, H., Martin, P. G. P. and Pineau, T. (2009) Identification of potential mechanisms of toxicity after di-(2-ethylhexyl)-phthalate (DEHP) adult exposure in the liver using a systems biology approach. Toxicology and applied pharmacology, 236 (3). pp. 282-292. doi: 10.1016/j.taap.2009.02.008
Claus, S. P., Tsang, T. M., Wang, Y., Cloarec, O., Skordi, E., Martin, F.-P., Rezzi, S., Ross, A., Kochhar, S., Holmes, E. and Nicholson, J. K. (2008) Systemic multicompartmental effects of the gut microbiome on mouse metabolic phenotypes. Molecular systems biology, 4 (219). doi: 10.1038/msb.2008.56
Skordi, E., Yap, I. K.S., Claus, S. P., Martin, F.-P. J., Cloarec, O., Lindberg, J., Schuppe-Koistinen, I., Holmes, E. and Nicholson, J. K. (2007) Analysis of time-related metabolic fluctuations induced by ethionine in the rat. Journal of Proteome Research, 6 (12). pp. 4572-4581. doi: 10.1021/pr070268q
