• Beaumont, M., Portune, K.J., Steuer, N., Lan, A., Cerrudo, V., Audebert, M., Dumont, F., Mancano, G., Khodorova, N., Andriamihaja, M., et al. (2017). Quantity and source of dietary protein influence metabolite production by gut microbiota and rectal mucosa gene expression: a randomized, parallel, double-blind trial in overweight humans. Am J Clin Nutr 106, 158816–1019. doi: 10.3945/ajcn.117.158816
  • Mora-Ortiz, M. and Claus, S. P. (2017). Choline theft – an inside job. Cell Host & Microbe, 22 (3), 253-255. doi: 10.1016/j.chom.2017.08.017
  • Claus, S. P. (2017). Will Gut Microbiota Help Design the Next Generation of GLP-1-Based Therapies for Type 2 Diabetes? Cell Metabolism, 26 (1), 6-7.
  • Le Roy, C. I., Passey, J. L., Woodward, M. J., La Ragione, R. M., Claus, S. P. (2017). Metabonomics-based analysis of Brachyspira pilosicoli’s response to tiamulin reveals metabolic activity despite significant growth inhibition. Anaerobe, 45, 71-77.
  • Claus, S. P. (2017).Inulin prebiotic: is it all about bifidobacteria? Gut.doi: 10.1136/gutjnl-2016-313271
  • Fong, S. C. H. & Claus, S. P. (2016). Host Microbiota interactions in gut health: an update on current understanding and future perspectives. AgroFOOD Industry Hi Tech, 27 (5).
  • Le Roy, C. I., Mappley, L. J., La Ragione, R. M., Woodward, M. J., Claus, S. P. (2016). NMR-based metabolic characterization of chicken tissues and biofluids: a model for avian research. Metabolomics, 12 (10), 157. doi: 10.1007/s11306-016-1105-7
  • Matysik, S., Le Roy, C. I., Liebisch, G., Claus, S. P. (2016). Metabolomics of fecal samples: a practical consideration. Trends in Food Science & Technology. doi 10.1016/j.tifs.2016.05.011
  • Claus, S.P., Guillou, H. and Ellero-Simatos, S. (2016). The gut microbiota: a major player in the toxicity of environmental pollutants? npj Biofilms and Microbiomes, 2, 16003. doi: 10.1038/npjbiofilms.2016.3
  • Frej, A.D., Clark, J., Le Roy, C. I., Lilla, S., Thomason, P., Otto, G. P., et al. (2016). The inositol-3-phosphate synthase biosynthetic enzyme has distinct catalytic and metabolic roles. Molecular and Cellular Biology, 36 (10), 1464-79.doi: 10.1128/MCB.00039-16
  • Bindels, L. B., Neyrinck, A. M., Claus, S. P., Le Roy, C. I., Grangette, C., Pot, B., et al. (2015). Synbiotic approach restores intestinal homeostasis and prolongs survival in leukaemic mice with cachexia. ISME Journal.doi: 10.1038/ismej.2015.209
  • Le Roy, C. I., Štšepetova, J., Sepp, E., Songisepp, E., Claus, S. P., & Mikelsaar, M. (2015). New insights into the impact of Lactoacillus population on host-bacteria metabolic interplay. Oncotarget, 1–12.Free text
  • Woodward, M. J., Mappley, L., Le Roy, C., Claus, S. P., Davies, P., Thompson, G., & La Ragione, R. M. (2015). Drinking water application of Denagard® Tiamulin for control of Brachyspira pilosicoli infection of laying poultry. Research in Veterinary Science, 103, 87–95. doi: 10.1016/j.rvsc.2015.09.015
  • Vulevic, J., Juric, A., Walton, G. E., Claus, S. P., Tzortzis, G., Toward, R. E., & Gibson, G. R. (2015). Influence of galacto-oligosaccharide mixture (B-GOS) on gut microbiota, immune parameters and metabonomics in elderly persons. British Journal of Nutrition, 114 (04), 1–10. doi: 10.1017/S0007114515001889
  • Karani, S. V. & Claus, S. P. (2015). Foodomics for personalised nutrition: how far are we?. Current Opinion in Food Science, 4, 129-135. doi: 10.1016/j.cofs.2015.07.001
  • Claus, S. P. (2014). Mammalian-Microbial Cometabolism of L-Carnitine in the Context of Atherosclerosis. Cell Metabolism, 20(5), 699–700. doi:10.1016/j.cmet.2014.10.014
  • Claus, S. P. (2014). Development of personalized functional foods needs metabolic profiling. Current Opinion in Clinical Nutrition and Metabolic Care, 17 567–573. doi:10.1097/MCO.0000000000000107
  • Swann, J. R., and Claus, S. P. (2014). Nutrimetabonomics: nutritional applications of metabolic profiling. Science Progress, 97 (1). pp. 41–47. doi:10.3184/003685014X13898807933527
  • El Aidy, S., Merrifield, C. A., Derrien, M., van Baarlen, P., Hooiveld, G., Levenez, F., Doré, J., Dekker, J., Holmes, E., Claus, S. P., Reijngoud, D. J. and Kleerebezem, M. (2013) The gut microbiota elicits a profound metabolic reorientation in the mouse jejunal mucosa during conventionalisation. Gut, 62 (9). pp. 1306-1314. doi: 10.1136/gutjnl-2011-301955
  • Dewulf, E. M., Cani, P. D., Claus, S. P., Fuentes, S., Puylaert, P. G. B., Neyrinck, A. M., Bindels, L. B., de Vos, W. M., Gibson, G. R., Thissen, J.-P. and Delzenne, N. M. (2013) Insight into the prebiotic concept: lessons from an exploratory, double blind intervention study with inulin-type fructans in obese women. Gut, 32 (8). pp. 1112-1121. doi: 10.1136/gutjnl-2012-303304
  • Merrifield, C. A., Lewis, M. C., Claus, S., Pearce, J. T. M., Cloarec, O., Duncker, S., Heinzmann, S. S., Dumas, M., Kochhar, S., Rezzi, S., Mercenier, A., Nicholson, J. K., Bailey, M. and Holmes, E. (2013) Weaning diet induces sustained metabolic phenotype shift in the pig and influences host response to Bifidobacterium lactis NCC2818. Gut, 62 (6). pp. 842-851. doi: 10.1136/gutjnl-2011-301656
  • El Aidy, S., Derrien, M., Merrifield, C. A., Levenez, F., Dore, J., Boekschoten, M. V., Dekker, J., Holmes, E., Zoetendal, E. G., van Baarlen, P., Claus, S. P. and Kleerbezem, M. (2013) Gut bacteria-host metabolic interplay during conventionalisation of the mouse germfree colon. ISME Journal, 7. pp. 743-755. doi: 10.1038/ismej.2012.142
  • Claus, S. P. (2013) Fighting undernutrition: don’t forget the bugs. Cell Host and Microbe, 13 (3). pp. 239-240. doi: 10.1016/j.chom.2013.02.015
  • Boulange, C. L., Claus, S. P., Chou, C. J., Collino, S., Montoliu, I., Kochhar, S., Holmes, E., Rezzi, S., Nicholson, J. K., Dumas, M. E. and Martin, F.-P. J. (2013) Early metabolic adaptation in C57BL/6 mice resistant to high fat diet induced weight gain involves an activation of mitochondrial oxidative pathways. Journal of Proteome Research, 12 (4). pp. 1956-1968. doi: 10.1021/pr400051s
  • Claus, S. P. and Swann, J. R. (2013) Nutrimetabonomics: applications for nutritional sciences, with specific reference to gut microbial interactions. Annual Review of Food Science and Technology, 4. pp. 381-399. doi: 10.1146/annurev-food-030212-182612
  • Richards, S. E., Wang, Y., Claus, S. P., Lawler, D., Kochhar, S., Holmes, E. and Nicholson, J. K. (2013) Metabolic phenotype modulation by caloric restriction in a lifelong dog study. Journal of Proteome Research, 12 (7). pp. 3117-3127. doi: 10.1021/pr301097k
  • De Castro, N. M., Yaqoob, P., De la Fuente, M., Baeza, I. and Claus, S. P. (2013) Premature impairment of methylation pathway and cardiac metabolic dysfunction in fa/fa obese Zucker rats. Journal of Proteome Research, 2 (4). pp. 1935–1945. doi: 10.1021/pr400025y
  • Merrifield, C. A., Lewis, M. C., Claus, S. P., Pearce, J. T. M., Cloarec, O., Duncker, S., Heinzmann, S. S., Dumas, M.-E., Kochar, S., Rezzi, S., Mercenier, A., Nicholson, J. K., Bailey, M. and Holmes, E. (2013) Weaning diet induces sustained metabolic phenotype
    shift in the pig and influences host response to
    Bifidobacterium lactis NCC2818. Gut, 62 (6). pp. 842-851. doi: 10.1136/gutjnl-2011-301656
  • Mestdagh, R., Dumas, M.-E., Rezzi, S., Kochhar, S., Holmes, E., Claus, S. P. and Nicholson, J. K. (2012) Gut microbiota modulate the metabolism of brown adipose tissue in mice. Journal of Proteome Research, 11 (2). pp. 620-630. doi: 10.1021/pr200938v
  • Cunningham, K., Claus, S. P., Lindon, J. C., Holmes, E., Everett, J. R., Nicholson, J. K. and Coen, M. (2012) Pharmacometabonomic characterization of xenobiotic and endogenous metabolic phenotypes that account for inter-individual variation in isoniazid-induced toxicological response. Journal of Proteome Research, 11 (9). pp. 4630-4642. doi: 10.1021/pr300430u
  • Heath, P. and Claus, S. (2011) Assessing hepatic metabolic changes during progressive colonization of germ-free mouse by 1H NMR spectroscopy. Journal of Visualized Experiments, 58. doi: 10.3791/3642
  • Claus, S. P., Ellero, S. L., Berger, B., Krause, L., Bruttin, A., Molina, J., Paris, A., Want, E. J., de Waziers, I., Cloarec, O., Richards, S. E., Wang, Y., Dumas, M.-E., Ross, A., Rezzi, S., Kochhar, S., Van Bladeren, P., Lindon, J. C., Holmes, E. and Nicholson, J. K. (2011) Colonization-induced host-gut microbial metabolic interaction. mBio, 2 (2). e00271-10. doi: 10.1128/mBio.00271-10
  • Ellero-Simatos, S., Claus, S. P., Benelli, C., Forest, C., Letourneur, F., Cagnard, N., Beaune, P. H. and de Waziers, I. (2011) Combined transcriptomic-(1)H NMR metabonomic study reveals yhat monoethylhexyl phthalate stimulates adipogenesis and glyceroneogenesis in human adipocytes. Journal of Proteome Research, 10 (12). pp. 5493-5502. doi: 10.1021/pr200765v
  • Merrifield, C. A., Lewis, M., Claus, S. P., Beckonert, O. P., Dummas, M.-E., Duncker, S., Kochhar, S., Rezzi, S., Lindon, J. C., Bailey, M., Holmes, E. and Nicholson, J. K. (2011) A metabolic system-wide characterisation of the pig: a model
    for human physiology. Molecular Biosystems, 7 (9). pp. 2577-2588. doi: 10.1039/C1MB05023K
  • Eveillard, A., Lasserre, F., de Tayrac, M., Polizzi, A., Claus, S., Canlet, C., Mselli-Lakhal, L., Gotardi, G., Paris, A., Guillou, H., Martin, P. G. P. and Pineau, T. (2009) Identification of potential mechanisms of toxicity after di-(2-ethylhexyl)-phthalate (DEHP) adult exposure in the liver using a systems biology approach. Toxicology and applied pharmacology, 236 (3). pp. 282-292. doi: 10.1016/j.taap.2009.02.008
  • Claus, S. P., Tsang, T. M., Wang, Y., Cloarec, O., Skordi, E., Martin, F.-P., Rezzi, S., Ross, A., Kochhar, S., Holmes, E. and Nicholson, J. K. (2008) Systemic multicompartmental effects of the gut microbiome on mouse metabolic phenotypes. Molecular systems biology, 4 (219). doi: 10.1038/msb.2008.56
  • Skordi, E., Yap, I. K.S., Claus, S. P., Martin, F.-P. J., Cloarec, O., Lindberg, J., Schuppe-Koistinen, I., Holmes, E. and Nicholson, J. K. (2007) Analysis of time-related metabolic fluctuations induced by ethionine in the rat. Journal of Proteome Research, 6 (12). pp. 4572-4581. doi: 10.1021/pr070268q